| Protein ZmHB59 | |
|---|---|
|
ZmHB59 is a protein in the Homeobox family.
|
|
| Information | |
| TF Name: | ZmHB59 |
| Species: | Maize |
| TF Family: | Homeobox |
| Gene Name(Synonym): | HB59 |
| Uniprot ID: | B6TWR7 |
| Subgenome: | 2 |
Protein ZmHB59
ZmHB59 is a protein in the Homeobox family.
| Overview of domains present in v5 transcripts | ||
|---|---|---|
| PF00046 | PF02183 | |
| Zm00001eb100690_T001 |  | |
| Zm00001eb100690_T002 | | |
Protein-DNA Interactions
Meme Logos for Maize v4 Gene IDs
| Gene ID | Type | MEME Logo | Sequence | FIMO | Position |
|---|---|---|---|---|---|
| Zm00001d005875 | DAPseq |  |
sequence | fimo | position |
| Zm00001d005875 | DAPseq |  |
sequence | fimo | position |
| Zm00001d005875 | ChIPseq |  |
sequence | fimo | position |
| Zm00001d005875 | PChIPseq |  |
sequence | fimo | position |
Interactions where ZmHB59 is the regulator
Interactions where ZmHB59 is the target
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Zm00001eb100690_T001 from maize genome v5
Amino Acid Sequence
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MELGLSLGETMADSGSDLVLGLGMGVGVRREEETQRGRRDREARRELEFETGRCARPSPEPAVRLTLLPGLVPSLGLPWP
LSSETNREVSTRGFDDVNRALSVAGAGAEEDEAAVAAATAAASSSPNNSSGSFAMDISAQGQGQGQDQAAPAADRACSRA
SDEDDGGSARKKLRLSKEQSAFLEESFKVRATPNPKQKLALARQLNLRARQVEVWFQNRRARTKLKQTEVDCEHLKRCCE
TLTGENRRLHKELAELRALKAVRPLLHMHLPATTLSMCPSCERVASTSSAAPAAPAPASPSPAAGAGIAASAPDPDQRPS
SSFAA
MELGLSLGETMADSGSDLVLGLGMGVGVRREEETQRGRRDREARRELEFETGRCARPSPEPAVRLTLLPGLVPSLGLPWP
LSSETNREVSTRGFDDVNRALSVAGAGAEEDEAAVAAATAAASSSPNNSSGSFAMDISAQGQGQGQDQAAPAADRACSRA
SDEDDGGSARKKLRLSKEQSAFLEESFKVRATPNPKQKLALARQLNLRARQVEVWFQNRRARTKLKQTEVDCEHLKRCCE
TLTGENRRLHKELAELRALKAVRPLLHMHLPATTLSMCPSCERVASTSSAAPAAPAPASPSPAAGAGIAASAPDPDQRPS
SSFAA
MELGLSLGETMADSGSDLVLGLGMGVGVRREEETQRGRRDREARRELEFETGRCARPSPEPAVRLTLLPGLVPSLGLPWP
LSSETNREVSTRGFDDVNRALSVAGAGAEEDEAAVAAATAAASSSPNNSSGSFAMDISAQGQGQGQDQAAPAADRACSRA
SDEDDGGSARKKLRLSKEQSAFLEESFKVRATPNPKQKLALARQLNLRARQVEVWFQNRRARTKLKQTEVDCEHLKRCCE
TLTGENRRLHKELAELRALKAVRPLLHMHLPATTLSMCPSCERVASTSSAAPAAPAPASPSPAAGAGIAASAPDPDQRPS
SSFAA
MELGLSLGETMADSGSDLVLGLGMGVGVRREEETQRGRRDREARRELEFETGRCARPSPEPAVRLTLLPGLVPSLGLPWP
LSSETNREVSTRGFDDVNRALSVAGAGAEEDEAAVAAATAAASSSPNNSSGSFAMDISAQGQGQGQDQAAPAADRACSRA
SDEDDGGSARKKLRLSKEQSAFLEESFKVRATPNPKQKLALARQLNLRARQVEVWFQNRRARTKLKQTEVDCEHLKRCCE
TLTGENRRLHKELAELRALKAVRPLLHMHLPATTLSMCPSCERVASTSSAAPAAPAPASPSPAAGAGIAASAPDPDQRPS
SSFAA
MELGLSLGETMADSGSDLVLGLGMGVGVRREEETQRGRRDREARRELEFETGRCARPSPEPAVRLTLLPGLVPSLGLPWP
LSSETNREVSTRGFDDVNRALSVAGAGAEEDEAAVAAATAAASSSPNNSSGSFAMDISAQGQGQGQDQAAPAADRACSRA
SDEDDGGSARKKLRLSKEQSAFLEESFKVRATPNPKQKLALARQLNLRARQVEVWFQNRRARTKLKQTEVDCEHLKRCCE
TLTGENRRLHKELAELRALKAVRPLLHMHLPATTLSMCPSCERVASTSSAAPAAPAPASPSPAAGAGIAASAPDPDQRPS
SSFAA
MELGLSLGETMADSGSDLVLGLGMGVGVRREEETQRGRRDREARRELEFETGRCARPSPEPAVRLTLLPGLVPSLGLPWP
LSSETNREVSTRGFDDVNRALSVAGAGAEEDEAAVAAATAAASSSPNNSSGSFAMDISAQGQGQGQDQAAPAADRACSRA
SDEDDGGSARKKLRLSKEQSAFLEESFKVRATPNPKQKLALARQLNLRARQVEVWFQNRRARTKLKQTEVDCEHLKRCCE
TLTGENRRLHKELAELRALKAVRPLLHMHLPATTLSMCPSCERVASTSSAAPAAPAPASPSPAAGAGIAASAPDPDQRPS
SSFAA
| Secondary Structure Color Code | |
|---|---|
| BEND | region with high backbone curvature without specific hydrogen bonding |
| HELX_LH_PP_P | left-handed polyproline helix |
| HELX_RH_3T_P | right-handed 3-10 helix |
| HELX_RH_AL_P | right-handed alpha helix |
| HELX_RH_PI_P | right-handed pi helix |
| STRN | beta strand |
| TURN_TY1_P | type I turn |
| UNDETERMINED | no data available |
| Domains Present | |
|---|---|
| PF00046 |
|
| PF02183 |
|
| Hover here to show all domains | |
Nucleotide Sequence
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CGAAGGAGTGAGGGAGGAGACCAGG...
CGAAGGAGTGAGGGAGGAGACCAGGAGAGGCGTGGGCCGACGGCCGAGCCGGGCGCCTCCTTCGGTCTTTCCGGCTGCTGCTATAAAGCCCAGCTGGCCTGGCGCGTCCCGACGGTTCCATTACTGGTCCCTGGCAGGATGGAGTTGGGGCTCAGCTTGGGGGAGACCATGGCGGATTCCGGGAGCGACCTCGTGCTTGGGCTTGGGATGGGGGTCGGGGTGCGGAGGGAGGAGGAAACGCAGAGAGGGAGGAGGGATAGGGAGGCGAGGAGGGAGCTTGAGTTTGAGACGGGGAGGTGCGCCCGGCCGTCGCCGGAGCCGGCGGTGCGACTCACGCTCCTGCCAGGCCTGGTGCCTAGCCTTGGCCTCCCGTGGCCGCTGTCGTCCGAGACCAATCGTGAGGTGTCGACGCGTGGCTTCGACGACGTGAACCGGGCGCTGTCCGTGGCCGGTGCTGGCGCGGAGGAGGACGAGGCGGCCGTGGCCGCAGCCACGGCGGCAGCATCCTCGTCGCCTAATAACAGCTCGGGCTCCTTCGCGATGGACATCTCCGCGCAGGGCCAGGGCCAGGGCCAGGACCAGGCGGCGCCCGCCGCCGACCGCGCGTGCTCGCGCGCCAGCGACGAGGACGACGGCGGCTCGGCGCGCAAGAAGCTGCGCCTCTCCAAGGAACAGTCCGCGTTCCTGGAGGAGAGCTTCAAGGTGCGCGCCACGCCGAACCCGAAGCAGAAGCTGGCGCTGGCGAGGCAGCTCAACCTGCGGGCGCGCCAGGTGGAGGTGTGGTTCCAGAACCGCAGGGCCAGGACGAAGCTGAAGCAGACGGAGGTGGACTGCGAGCACCTGAAGCGCTGCTGCGAGACGCTGACGGGGGAGAACCGGCGGCTGCACAAGGAGCTAGCCGAGCTCCGCGCGCTCAAGGCGGTGCGCCCCTTGTTGCACATGCACCTCCCGGCCACCACCCTCTCCATGTGCCCCTCCTGCGAGCGCGTCGCCTCCACCAGCTCCGCGGCCCCCGCCGCGCCGGCGCCAGCGTCGCCCTCACCTGCTGCTGGTGCTGGCATTGCGGCGTCGGCCCCGGACCCGGATCAGAGGCCCTCGTCGTCGTTCGCGGCGTGAGGCCCTCTCTGCTTTACCTCCGGCGGCGCGAATGAAGGAGGATATGGCTGTAAATACGATCAACTTTTTTTTTTCTTCTTCCTTGTTTTTTTCACTTCATGCGGTTCTTGGGTTTTTTTGGACTGCCGATGGATCCGAGGGTGTAGCGCGTCGTCTGGCCGTGTCGGATTGGACTGGGACGGCCAGGGTGCAGAAAGAATCAGAGGTGCCGCAATAGAGTTCATTCATTAACCTCATCAGTAGCGTCGATCATGTGCTATTTCCTTGCTATCGCGGCGTCAACCGTCAATATAGGCCTTTGAAATCGGATGTTACCAAGTCGTTAAAATGA
GRMZM2G366130_T01 from maize genome v3
Amino Acid Sequence
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MADSGSDLVLGLGMGVGVRREEETQRGRRDREARRELEFETGRCARPSPEPAVRLTLLPGLVPSLGLPWPLSSETNREVS
TRGFDDVNRALSVAGAGAEEDEAAVAAATAAASSSPNNSSGSFAMDISAQGQGQGQDQAAPAADRACSRASDEDDGGSAR
KKLRLSKEQSAFLEESFKVRATPNPKQKLALARQLNLRARQVEVWFQNRRARTKLKQTEVDCEHLKRCCETLTGENRRLH
KELAELRALKAVRPLLHMHLPATTLSMCPSCERVASTSSAAPAAPAPASPSPAAGAGIAASAPDPDQRPSSSFAA
Nucleotide Sequence
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ATGGCGGATTCCGGGAGCGACCTCG...
ATGGCGGATTCCGGGAGCGACCTCGTGCTTGGGCTTGGGATGGGGGTCGGGGTGCGGAGGGAGGAGGAAACGCAGAGAGGGAGGAGGGATAGGGAGGCGAGGAGGGAGCTTGAGTTTGAGACGGGGAGGTGCGCCCGGCCGTCGCCGGAGCCGGCGGTGCGACTCACGCTCCTGCCAGGCCTGGTGCCTAGCCTTGGCCTCCCGTGGCCGCTGTCGTCCGAGACCAATCGTGAGGTGTCGACGCGTGGCTTCGACGACGTGAACCGGGCGCTGTCCGTGGCCGGTGCTGGCGCGGAGGAGGACGAGGCGGCCGTGGCCGCAGCCACGGCGGCAGCATCCTCGTCGCCTAATAACAGCTCGGGCTCCTTCGCGATGGACATCTCCGCGCAGGGCCAGGGCCAGGGCCAGGACCAGGCGGCGCCCGCCGCCGACCGCGCGTGCTCGCGCGCCAGCGACGAGGACGACGGCGGCTCGGCGCGCAAGAAGCTGCGCCTCTCCAAGGAACAGTCCGCGTTCCTGGAGGAGAGCTTCAAGGTGCGCGCCACGCCGAACCCGAAGCAGAAGCTGGCGCTGGCGAGGCAGCTCAACCTGCGGGCGCGCCAGGTGGAGGTGTGGTTCCAGAACCGCAGGGCCAGGACGAAGCTGAAGCAGACGGAGGTGGACTGCGAGCACCTGAAGCGCTGCTGCGAGACGCTGACGGGGGAGAACCGGCGGCTGCACAAGGAGCTAGCCGAGCTCCGCGCGCTCAAGGCGGTGCGCCCCTTGTTGCACATGCACCTCCCGGCCACCACCCTCTCCATGTGCCCCTCCTGCGAGCGCGTCGCCTCCACCAGCTCCGCGGCCCCCGCCGCGCCGGCGCCAGCGTCGCCCTCACCTGCTGCTGGTGCTGGCATTGCGGCGTCGGCCCCGGACCCGGATCAGAGGCCCTCGTCGTCGTTCGCGGCGTGA
Zm00001d005875_T001 from maize genome v4
Amino Acid Sequence
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MELGLSLGETMADSGSDLVLGLGMGVGVRREEETQRGRRDREARRELEFETGRCARPSPEPAVRLTLLPGLVPSLGLPWP
LSSETNREVSTRGFDDVNRALSVAGAGAEEDEAAVAAATAAASSSPNNSSGSFAMDISAQGQGQGQDQAAPAADRACSRA
SDEDDGGSARKKLRLSKEQSAFLEESFKVRATPNPKQKLALARQLNLRARQVEVWFQNRRARTKLKQTEVDCEHLKRCCE
TLTGENRRLHKELAELRALKAVRPLLHMHLPATTLSMCPSCERVASTSSAAPAAPAPASPSPAAGAGIAASAPDPDQRPS
SSFAA
Nucleotide Sequence
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CTGGTCCCTGGCAGGATGGAGTTGG...
CTGGTCCCTGGCAGGATGGAGTTGGGGCTCAGCTTGGGGGAGACCATGGCGGATTCCGGGAGCGACCTCGTGCTTGGGCTTGGGATGGGGGTCGGGGTGCGGAGGGAGGAGGAAACGCAGAGAGGGAGGAGGGATAGGGAGGCGAGGAGGGAGCTTGAGTTTGAGACGGGGAGGTGCGCCCGGCCGTCGCCGGAGCCGGCGGTGCGACTCACGCTCCTGCCAGGCCTGGTGCCTAGCCTTGGCCTCCCGTGGCCGCTGTCGTCCGAGACCAATCGTGAGGTGTCGACGCGTGGCTTCGACGACGTGAACCGGGCGCTGTCCGTGGCCGGTGCTGGCGCGGAGGAGGACGAGGCGGCCGTGGCCGCAGCCACGGCGGCAGCATCCTCGTCGCCTAATAACAGCTCGGGCTCCTTCGCGATGGACATCTCCGCGCAGGGCCAGGGCCAGGGCCAGGACCAGGCGGCGCCCGCCGCCGACCGCGCGTGCTCGCGCGCCAGCGACGAGGACGACGGCGGCTCGGCGCGCAAGAAGCTGCGCCTCTCCAAGGAACAGTCCGCGTTCCTGGAGGAGAGCTTCAAGGTGCGCGCCACGCCGAACCCGAAGCAGAAGCTGGCGCTGGCGAGGCAGCTCAACCTGCGGGCGCGCCAGGTGGAGGTGTGGTTCCAGAACCGCAGGGCCAGGACGAAGCTGAAGCAGACGGAGGTGGACTGCGAGCACCTGAAGCGCTGCTGCGAGACGCTGACGGGGGAGAACCGGCGGCTGCACAAGGAGCTAGCCGAGCTCCGCGCGCTCAAGGCGGTGCGCCCCTTGTTGCACATGCACCTCCCGGCCACCACCCTCTCCATGTGCCCCTCCTGCGAGCGCGTCGCCTCCACCAGCTCCGCGGCCCCCGCCGCGCCGGCGCCAGCGTCGCCCTCACCTGCTGCTGGTGCTGGCATTGCGGCGTCGGCCCCGGACCCGGATCAGAGGCCCTCGTCGTCGTTCGCGGCGTGAGGCCCTCTCTGCTTTACCTCCGGCGGCGCGAATGAAGGAGGATATGGCTGTAAATACGATCAACTTTTTTTTTTCTTCTTCCTTGTTTTTTTCACTTCATGCGGTTCTTGGGTTTTTTTGGACTGCCGATGGATCCGAGGGTGTAGCGCGTCGTCTGGCCGTGTCGGATTGGACTGGGACGGCCAGGGTGCAGAAAGAATCAGAGGTGCCGCAATAGAGTTCATTCATTAACCTCATCAGTAGCGTCGATCATGTGCTATT
Zm00001eb100690_T002 from maize genome v5
Amino Acid Sequence
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MDISAQGQGQGQDQAAPAADRACSRASDEDDGGSARKKLRLSKEQSAFLEESFKKQKLALARQLNLRARQVEVWFQNRRA
RTKLKQTEVDCEHLKRCCETLTGENRRLHKELAELRALKAVRPLLHMHLPATTLSMCPSCERVASTSSAAPAAPAPASPS
PAAGAGIAASAPDPDQRPSSSFAA
Nucleotide Sequence
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GGAGGTGCGCCCGGCCGTCGCCGGA...
GGAGGTGCGCCCGGCCGTCGCCGGAGCCGGCGGTGCGACTCACGCTCCTGCCAGGCCTGGTGCCTAGCCTTGGCCTCCCGTGGCCGCTGTCGTCCGAGACCAATCGTGAGGTGTCGACGCGTGGCTTCGACGACGTGAACCGGGCGCTGTCCGTGGCCGGTGCTGGCGCGGAGGAGGACGAGGCGGCCGTGGCCGCAGCCACGGCGGCAGCATCCTCGTCGCCTAATAACAGCTCGGGCTCCTTCGCGATGGACATCTCCGCGCAGGGCCAGGGCCAGGGCCAGGACCAGGCGGCGCCCGCCGCCGACCGCGCGTGCTCGCGCGCCAGCGACGAGGACGACGGCGGCTCGGCGCGCAAGAAGCTGCGCCTCTCCAAGGAACAGTCCGCGTTCCTGGAGGAGAGCTTCAAGAAGCAGAAGCTGGCGCTGGCGAGGCAGCTCAACCTGCGGGCGCGCCAGGTGGAGGTGTGGTTCCAGAACCGCAGGGCCAGGACGAAGCTGAAGCAGACGGAGGTGGACTGCGAGCACCTGAAGCGCTGCTGCGAGACGCTGACGGGGGAGAACCGGCGGCTGCACAAGGAGCTAGCCGAGCTCCGCGCGCTCAAGGCGGTGCGCCCCTTGTTGCACATGCACCTCCCGGCCACCACCCTCTCCATGTGCCCCTCCTGCGAGCGCGTCGCCTCCACCAGCTCCGCGGCCCCCGCCGCGCCGGCGCCAGCGTCGCCCTCACCTGCTGCTGGTGCTGGCATTGCGGCGTCGGCCCCGGACCCGGATCAGAGGCCCTCGTCGTCGTTCGCGGCGTGAGGCCCTCTCTGCTTTACCTCCGGCGGCGCGAATGAAGGAGGATATGGCTGTAAATACGATCAACTTTTTTTTTTCTTCTTCCTTGTTTTTTTCACTTCATGCGGTTCTTGGGTTTTTTTGGACTGCCGATGGATCCGAGGGTGTAGCGCGTCGTCTGGCCGTGTCGGATTGGACTGGGACGGCCAGGGTGCAGAAAGAATCAGAGGTGCCGCAATAGAGTTCATTCATTAACCTCATCAGTAGCGTCGATCATGTGCTATTTCCTTGCTATCGCGGCGTCAA
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